STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_0728340S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)    
Predicted Functional Partners:
BDCG_16501
50S ribosomal protein L5e.
  
 0.999
BDCG_16626
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.999
BDCG_16622
40S ribosomal protein S29.
  
 0.999
BDCG_07126
60S ribosomal protein L7, variant.
  
 0.999
BDCG_17788
Uncharacterized protein.
  
 0.999
BDCG_01113
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.999
BDCG_01327
50S ribosomal protein L32e.
   
 0.999
BDCG_00554
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.999
BDCG_00611
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
  
 0.999
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.999
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.