STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_07601Kinetochore protein spc24. (200 aa)    
Predicted Functional Partners:
BDCG_01401
Kinetochore protein spc25.
    
 
 0.988
BDCG_00690
Kinetochore protein ndc80.
    
 
 0.971
BDCG_04057
Kinetochore protein nuf2.
    
 
 0.949
BDCG_06040
Mis12-Mtw1 domain-containing protein.
    
 
 0.945
BDCG_08726
Chromosome segregation protein.
    
 
 0.844
BDCG_08410
Spindle pole body component, variant.
    
 
 0.576
BDCG_03062
Uncharacterized protein.
    
 
 0.540
BDCG_03912
Spindle pole body component.
    
 
 0.536
BDCG_07333
Chromosome segregation protein.
   
 
 0.497
BDCG_00485
Uncharacterized protein.
    
 
 0.495
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.