Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDCG_02701 | BDCG_04013 | C5GEI2 | C5GJ18 | Small nucleolar ribonucleoprotein complex subunit, variant. | rRNA maturation protein. | 0.999 |
BDCG_02701 | BDCG_04439 | C5GEI2 | C5GI53 | Small nucleolar ribonucleoprotein complex subunit, variant. | Periodic tryptophan protein 2. | 0.998 |
BDCG_02701 | BDCG_06187 | C5GEI2 | C5GN19 | Small nucleolar ribonucleoprotein complex subunit, variant. | rRNA biogenesis protein RRP5. | 0.999 |
BDCG_02701 | BDCG_06400 | C5GEI2 | C5GP42 | Small nucleolar ribonucleoprotein complex subunit, variant. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
BDCG_02701 | BDCG_06497 | C5GEI2 | C5GR67 | Small nucleolar ribonucleoprotein complex subunit, variant. | U3 small nucleolar RNA-associated protein 22. | 0.998 |
BDCG_02701 | BDCG_06520 | C5GEI2 | C5GR90 | Small nucleolar ribonucleoprotein complex subunit, variant. | WD domain-containing protein. | 0.999 |
BDCG_02701 | BDCG_06662 | C5GEI2 | C5GQ15 | Small nucleolar ribonucleoprotein complex subunit, variant. | U3 small nucleolar RNA-associated protein 10. | 0.999 |
BDCG_02701 | BDCG_07376 | C5GEI2 | C5GRR4 | Small nucleolar ribonucleoprotein complex subunit, variant. | Small nucleolar ribonucleoprotein complex subunit. | 0.999 |
BDCG_02701 | BDCG_07682 | C5GEI2 | C5GTD9 | Small nucleolar ribonucleoprotein complex subunit, variant. | HEAT repeat protein. | 0.999 |
BDCG_02701 | NAT10 | C5GEI2 | C5GCY7 | Small nucleolar ribonucleoprotein complex subunit, variant. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.997 |
BDCG_04013 | BDCG_02701 | C5GJ18 | C5GEI2 | rRNA maturation protein. | Small nucleolar ribonucleoprotein complex subunit, variant. | 0.999 |
BDCG_04013 | BDCG_04439 | C5GJ18 | C5GI53 | rRNA maturation protein. | Periodic tryptophan protein 2. | 0.998 |
BDCG_04013 | BDCG_06187 | C5GJ18 | C5GN19 | rRNA maturation protein. | rRNA biogenesis protein RRP5. | 0.999 |
BDCG_04013 | BDCG_06400 | C5GJ18 | C5GP42 | rRNA maturation protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
BDCG_04013 | BDCG_06497 | C5GJ18 | C5GR67 | rRNA maturation protein. | U3 small nucleolar RNA-associated protein 22. | 0.999 |
BDCG_04013 | BDCG_06520 | C5GJ18 | C5GR90 | rRNA maturation protein. | WD domain-containing protein. | 0.998 |
BDCG_04013 | BDCG_06662 | C5GJ18 | C5GQ15 | rRNA maturation protein. | U3 small nucleolar RNA-associated protein 10. | 0.994 |
BDCG_04013 | BDCG_07376 | C5GJ18 | C5GRR4 | rRNA maturation protein. | Small nucleolar ribonucleoprotein complex subunit. | 0.994 |
BDCG_04013 | BDCG_07682 | C5GJ18 | C5GTD9 | rRNA maturation protein. | HEAT repeat protein. | 0.999 |
BDCG_04013 | NAT10 | C5GJ18 | C5GCY7 | rRNA maturation protein. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.998 |
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