STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_07788SP-RING-type domain-containing protein. (487 aa)    
Predicted Functional Partners:
BDCG_06791
SMC_N domain-containing protein.
    
 0.998
BDCG_06504
DNA repair protein Rad18.
    
 0.998
BDCG_09414
DNA repair protein Nse1.
    
 0.998
BDCG_04159
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
    
 0.996
BDCG_00827
MAGE domain-containing protein.
    
 0.981
BDCG_00490
Uncharacterized protein.
    
 0.973
BDCG_02378
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.957
BDCG_02620
Structural maintenance of chromosomes protein.
    
 0.904
BDCG_08449
SMT3 protein.
   
 0.902
BDCG_08800
Structural maintenance of chromosomes protein.
    
 0.881
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.