STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_07946COP9 signalosome subunit CsnD. (422 aa)    
Predicted Functional Partners:
BDCG_00290
COP9 subunit 3.
   
 0.999
BDCG_01320
COP9 signalosome complex subunit 5.
   
 0.999
BDCG_05886
COP9 signalosome complex subunit 2.
   
 0.999
BDCG_07853
COP9 signalosome subunit 6.
   
 0.999
BDCG_08016
COP9 signalosome subunit 1.
   
 0.999
BDCG_03292
COP9 signalosome complex subunit 7a.
  
 0.997
BDCG_08078
COP9 signalosome subunit 8.
   
 0.997
BDCG_09190
RING-box protein 1.
   
 0.981
BDCG_17065
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.953
BDCG_02010
Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 0.917
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.