STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_08303SWI/SNF family DNA-dependent ATPase Ris1, variant. (1150 aa)    
Predicted Functional Partners:
BDCG_08449
SMT3 protein.
    
 0.834
BDCG_16357
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.812
BDCG_01228
DNA repair protein rad18.
   
 0.796
BDCG_02260
Ubiquitin-conjugating enzyme E2 35, variant; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.790
BDCG_05582
Ubiquitin-conjugating enzyme variant MMS2.
    
 0.782
BDCG_08205
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.772
BDCG_09461
Chromatin remodeling complex subunit; Belongs to the actin family.
    
 0.766
BDCG_06514
Exonuclease 1.
   
 0.742
BDCG_01461
DNA-directed RNA polymerase I, II, and III subunit RPABC2.
    
 0.739
BDCG_09460
Chromatin-remodeling complex subunit ies6.
    
 0.710
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.