STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_08819Ornithine aminotransferase. (458 aa)    
Predicted Functional Partners:
BDCG_00768
Arginase; Belongs to the arginase family.
 
 0.998
BDCG_06783
Protein Arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family.
  
 
 0.994
BDCG_03169
Ornithine decarboxylase, variant; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.961
BDCG_00281
Glutamate 5-kinase.
   
 0.957
BDCG_04675
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.954
BDCG_08444
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.954
BDCG_02913
Ornithine carbamoyltransferase, mitochondrial; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
 
 0.920
BDCG_01152
Glutamate decarboxylase.
 
   
 0.915
BDCG_03528
Biotin synthase.
 
 
 
 0.905
BDCG_01044
Argininosuccinate synthase.
  
 0.896
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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