STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDCG_09133rRNA processing protein Fcf2. (234 aa)    
Predicted Functional Partners:
BDCG_03463
Vesicle-mediated transporter Bfr2/Che-1.
   
 
 0.992
BDCG_04930
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.991
BDCG_08433
Sas10/Utp3 family protein.
   
 
 0.990
BDCG_07567
Ribosome biogenesis protein BMS1.
   
 
 0.989
BDCG_02456
U3 small nucleolar ribonucleoprotein Lcp5.
   
 
 0.988
BDCG_09365
SnoRNA binding protein.
   
 
 0.986
BDCG_08221
U3 small nucleolar RNA-associated protein 5.
   
 
 0.985
BDCG_00312
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
   0.984
BDCG_02701
Small nucleolar ribonucleoprotein complex subunit, variant.
   
 
 0.984
BDCG_03924
U3 small nucleolar ribonucleoprotein IMP4.
   
   0.984
Your Current Organism:
Blastomyces dermatitidis
NCBI taxonomy Id: 559297
Other names: Ajellomyces dermatitidis ER-3, B. dermatitidis ER-3, Blastomyces dermatitidis ER-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.