Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDCG_02132 | BDCG_07420 | C5GAQ1 | C5GRV8 | Mitochondrial outer membrane protein. | Mitochondrial import receptor subunit. | 0.828 |
BDCG_02132 | BDCG_09156 | C5GAQ1 | C5GXV5 | Mitochondrial outer membrane protein. | Mitochondrial import receptor subunit TOM40. | 0.956 |
BDCG_02132 | BDCG_09246 | C5GAQ1 | C5GY06 | Mitochondrial outer membrane protein. | ZIP Zinc transporter. | 0.519 |
BDCG_02132 | BDCG_09326 | C5GAQ1 | C5GY89 | Mitochondrial outer membrane protein. | Outer membrane protein. | 0.973 |
BDCG_06605 | BDCG_09246 | C5GRH5 | C5GY06 | CHA1 protein. | ZIP Zinc transporter. | 0.509 |
BDCG_07420 | BDCG_02132 | C5GRV8 | C5GAQ1 | Mitochondrial import receptor subunit. | Mitochondrial outer membrane protein. | 0.828 |
BDCG_07420 | BDCG_09156 | C5GRV8 | C5GXV5 | Mitochondrial import receptor subunit. | Mitochondrial import receptor subunit TOM40. | 0.970 |
BDCG_07420 | BDCG_09246 | C5GRV8 | C5GY06 | Mitochondrial import receptor subunit. | ZIP Zinc transporter. | 0.519 |
BDCG_07420 | BDCG_09326 | C5GRV8 | C5GY89 | Mitochondrial import receptor subunit. | Outer membrane protein. | 0.989 |
BDCG_07420 | MDM34 | C5GRV8 | C5GNU1 | Mitochondrial import receptor subunit. | Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10. | 0.455 |
BDCG_07420 | MMM1 | C5GRV8 | C5GLP2 | Mitochondrial import receptor subunit. | Maintenance of mitochondrial morphology protein 1; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. The MDM12-MMM1 subcomplex functions in the major beta-barrel assembly pathway that is responsible for biogenesis of all outer membrane beta- barrel proteins, and acts in a late step after the SAM complex. The MDM10-MDM12-MMM1 su [...] | 0.466 |
BDCG_08034 | BDCG_09246 | C5GUI6 | C5GY06 | CMGC/CK2 protein kinase; Belongs to the protein kinase superfamily. | ZIP Zinc transporter. | 0.471 |
BDCG_08034 | MMM1 | C5GUI6 | C5GLP2 | CMGC/CK2 protein kinase; Belongs to the protein kinase superfamily. | Maintenance of mitochondrial morphology protein 1; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. The MDM12-MMM1 subcomplex functions in the major beta-barrel assembly pathway that is responsible for biogenesis of all outer membrane beta- barrel proteins, and acts in a late step after the SAM complex. The MDM10-MDM12-MMM1 su [...] | 0.837 |
BDCG_09156 | BDCG_02132 | C5GXV5 | C5GAQ1 | Mitochondrial import receptor subunit TOM40. | Mitochondrial outer membrane protein. | 0.956 |
BDCG_09156 | BDCG_07420 | C5GXV5 | C5GRV8 | Mitochondrial import receptor subunit TOM40. | Mitochondrial import receptor subunit. | 0.970 |
BDCG_09156 | BDCG_09246 | C5GXV5 | C5GY06 | Mitochondrial import receptor subunit TOM40. | ZIP Zinc transporter. | 0.443 |
BDCG_09156 | BDCG_09326 | C5GXV5 | C5GY89 | Mitochondrial import receptor subunit TOM40. | Outer membrane protein. | 0.974 |
BDCG_09246 | BDCG_02132 | C5GY06 | C5GAQ1 | ZIP Zinc transporter. | Mitochondrial outer membrane protein. | 0.519 |
BDCG_09246 | BDCG_06605 | C5GY06 | C5GRH5 | ZIP Zinc transporter. | CHA1 protein. | 0.509 |
BDCG_09246 | BDCG_07420 | C5GY06 | C5GRV8 | ZIP Zinc transporter. | Mitochondrial import receptor subunit. | 0.519 |
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