STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDBG_00267Vesicle-mediated transporter Vid24. (337 aa)    
Predicted Functional Partners:
BDBG_04042
Ran-binding protein.
    
 
 0.979
BDBG_08918
CTLH domain-containing protein.
    
 
 0.951
BDBG_09100
CTLH domain-containing protein.
    
 
 0.813
BDBG_01516
WD domain-containing protein.
    
 
 0.806
BDBG_06849
Fructose-1,6-bisphosphatase I; Belongs to the FBPase class 1 family.
    
 
 0.752
BDBG_00266
Protein mago nashi.
 
      0.711
BDBG_02016
Uncharacterized protein.
    
 
 0.711
BDBG_08407
Protein SSH4.
    
 
 0.711
BDBG_00663
SAP30_Sin3_bdg domain-containing protein.
    
 
 0.600
BDBG_07681
Protein FYV10.
    
 
 0.437
Your Current Organism:
Blastomyces gilchristii
NCBI taxonomy Id: 559298
Other names: Ajellomyces dermatitidis SLH#14081, Ajellomyces dermatitidis SLH14081, B. gilchristii SLH14081, Blastomyces dermatitidis SLH14081, Blastomyces gilchristii SLH14081
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.