STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDBG_00471Uncharacterized protein. (377 aa)    
Predicted Functional Partners:
BDBG_03854
DNA-directed RNA polymerase I subunit RPA49.
   
 0.998
BDBG_03350
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.998
BDBG_04590
DNA-directed RNA polymerase I and III subunit RPAC1.
   
 0.998
BDBG_08921
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.998
BDBG_03013
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.997
BDBG_07747
DNA-directed RNA polymerase I and III subunit RPAC2.
   
 0.997
BDBG_04045
RNA polymerase I subunit Rpa43.
   
 0.996
BDBG_03039
DNA-directed RNA polymerase I, II, and III subunit RPABC1.
   
 0.995
BDBG_09023
DNA-directed RNA polymerase I, II, and III subunit RPABC2.
   
 0.993
BDBG_05098
DNA-directed RNA polymerase I, II, and III subunit RPABC5.
   
 0.991
Your Current Organism:
Blastomyces gilchristii
NCBI taxonomy Id: 559298
Other names: Ajellomyces dermatitidis SLH#14081, Ajellomyces dermatitidis SLH14081, B. gilchristii SLH14081, Blastomyces dermatitidis SLH14081, Blastomyces gilchristii SLH14081
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