Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDBG_00471 | BDBG_03013 | A0A179U7K7 | A0A179UIB5 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
BDBG_00471 | BDBG_03039 | A0A179U7K7 | A0A179UKF8 | Uncharacterized protein. | DNA-directed RNA polymerase I, II, and III subunit RPABC1. | 0.995 |
BDBG_00471 | BDBG_03350 | A0A179U7K7 | A0A179UJ61 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
BDBG_00471 | BDBG_03854 | A0A179U7K7 | A0A179UIH9 | Uncharacterized protein. | DNA-directed RNA polymerase I subunit RPA49. | 0.998 |
BDBG_00471 | BDBG_04045 | A0A179U7K7 | A0A179UM13 | Uncharacterized protein. | RNA polymerase I subunit Rpa43. | 0.996 |
BDBG_00471 | BDBG_04590 | A0A179U7K7 | A0A179UM16 | Uncharacterized protein. | DNA-directed RNA polymerase I and III subunit RPAC1. | 0.998 |
BDBG_00471 | BDBG_05098 | A0A179U7K7 | A0A179UQH5 | Uncharacterized protein. | DNA-directed RNA polymerase I, II, and III subunit RPABC5. | 0.991 |
BDBG_00471 | BDBG_07747 | A0A179U7K7 | A0A179UWB9 | Uncharacterized protein. | DNA-directed RNA polymerase I and III subunit RPAC2. | 0.997 |
BDBG_00471 | BDBG_08921 | A0A179U7K7 | A0A179V166 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.998 |
BDBG_00471 | BDBG_09023 | A0A179U7K7 | A0A179V0Q7 | Uncharacterized protein. | DNA-directed RNA polymerase I, II, and III subunit RPABC2. | 0.993 |
BDBG_03013 | BDBG_00471 | A0A179UIB5 | A0A179U7K7 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.997 |
BDBG_03013 | BDBG_03039 | A0A179UIB5 | A0A179UKF8 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase I, II, and III subunit RPABC1. | 0.999 |
BDBG_03013 | BDBG_03350 | A0A179UIB5 | A0A179UJ61 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
BDBG_03013 | BDBG_03854 | A0A179UIB5 | A0A179UIH9 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase I subunit RPA49. | 0.999 |
BDBG_03013 | BDBG_04045 | A0A179UIB5 | A0A179UM13 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase I subunit Rpa43. | 0.999 |
BDBG_03013 | BDBG_04590 | A0A179UIB5 | A0A179UM16 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase I and III subunit RPAC1. | 0.999 |
BDBG_03013 | BDBG_05098 | A0A179UIB5 | A0A179UQH5 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase I, II, and III subunit RPABC5. | 0.999 |
BDBG_03013 | BDBG_07747 | A0A179UIB5 | A0A179UWB9 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase I and III subunit RPAC2. | 0.998 |
BDBG_03013 | BDBG_08921 | A0A179UIB5 | A0A179V166 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.999 |
BDBG_03013 | BDBG_09023 | A0A179UIB5 | A0A179V0Q7 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase I, II, and III subunit RPABC2. | 0.999 |
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