STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDBG_00372RNP domain-containing protein. (474 aa)    
Predicted Functional Partners:
BDBG_06361
Pre-RNA splicing factor Srp2.
    
0.818
BDBG_16431
RRM domain-containing protein.
   
 0.597
BDBG_08091
Nuclear cap-binding protein subunit 2.
    
 0.540
BDBG_00933
RNA binding domain-containing protein.
   
0.493
BDBG_05112
Dihydrolipoyl dehydrogenase.
 
 
 
 0.418
BDBG_01733
U2 small nuclear ribonucleoprotein B.
    
 0.416
BDBG_09412
Cap binding protein, variant 1.
    
 0.403
Your Current Organism:
Blastomyces gilchristii
NCBI taxonomy Id: 559298
Other names: Ajellomyces dermatitidis SLH#14081, Ajellomyces dermatitidis SLH14081, B. gilchristii SLH14081, Blastomyces dermatitidis SLH14081, Blastomyces gilchristii SLH14081
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.