STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDBG_16263Uncharacterized protein. (853 aa)    
Predicted Functional Partners:
BDBG_05748
Elongation factor 3.
   
 
 0.992
BDBG_05334
Elongation factor 3.
   
 
 0.991
BDBG_16892
Ribosomal_L18_c domain-containing protein.
  
 0.989
BDBG_05001
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.988
BDBG_05469
60S ribosomal protein L30.
  
 0.988
BDBG_07669
50S ribosomal protein L23Ae.
  
 0.988
BDBG_09015
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.988
BDBG_09243
60S ribosomal protein L7, variant.
  
 0.988
BDBG_16076
Uncharacterized protein.
  
 0.987
BDBG_03506
30S ribosomal protein S6e.
   
 0.987
Your Current Organism:
Blastomyces gilchristii
NCBI taxonomy Id: 559298
Other names: Ajellomyces dermatitidis SLH#14081, Ajellomyces dermatitidis SLH14081, B. gilchristii SLH14081, Blastomyces dermatitidis SLH14081, Blastomyces gilchristii SLH14081
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.