STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDBG_01264RNA-dependent RNA polymerase. (1382 aa)    
Predicted Functional Partners:
BDBG_06531
RNA helicase.
      
 0.598
BDBG_03108
ATP-dependent rRNA helicase SPB4; Belongs to the DEAD box helicase family.
      
 0.580
BDBG_02186
RNA helicase.
      
 0.556
BDBG_16755
Uncharacterized protein.
      
 0.512
BDBG_04411
Dicer-like protein 1; Belongs to the helicase family. Dicer subfamily.
    
 
 0.489
BDBG_05708
Dicer-like protein 2; Belongs to the helicase family. Dicer subfamily.
    
 
 0.489
Your Current Organism:
Blastomyces gilchristii
NCBI taxonomy Id: 559298
Other names: Ajellomyces dermatitidis SLH#14081, Ajellomyces dermatitidis SLH14081, B. gilchristii SLH14081, Blastomyces dermatitidis SLH14081, Blastomyces gilchristii SLH14081
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.