STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDBG_01092WD repeat protein, variant. (492 aa)    
Predicted Functional Partners:
BDBG_08047
HEAT repeat protein.
  
 
 
 0.735
BDBG_03542
DNA-directed RNA polymerase.
   
 0.719
BDBG_05197
Mitotic spindle assembly checkpoint protein MAD2.
   
 0.671
BDBG_06742
Transcription initiation factor TFIID subunit 12.
   
 0.654
BDBG_01343
Transcription initiation factor TFIID subunit 6.
    
 0.653
BDBG_06467
Transcription initiation factor TFIID subunit 9B.
    
 0.653
BDBG_01031
Uncharacterized protein.
    
 0.652
BDBG_03514
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.645
BDBG_04301
Transcription initiation factor TFIID subunit 2.
    
 0.635
BDBG_01488
Anaphase-promoting complex subunit 6.
   
 0.634
Your Current Organism:
Blastomyces gilchristii
NCBI taxonomy Id: 559298
Other names: Ajellomyces dermatitidis SLH#14081, Ajellomyces dermatitidis SLH14081, B. gilchristii SLH14081, Blastomyces dermatitidis SLH14081, Blastomyces gilchristii SLH14081
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.