Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDBG_00482 | BDBG_00856 | A0A179U761 | A0A179UCL1 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | RevA protein. | 0.888 |
BDBG_00482 | BDBG_01210 | A0A179U761 | A0A179UBL3 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | DNA polymerase eta subunit. | 0.850 |
BDBG_00482 | BDBG_02777 | A0A179U761 | A0A179UHU6 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | DNA polymerase. | 0.977 |
BDBG_00482 | BDBG_02793 | A0A179U761 | A0A179UHW4 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | DNA polymerase delta subunit 3. | 0.805 |
BDBG_00482 | BDBG_03489 | A0A179U761 | A0A179UK93 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | DNA polymerase iota. | 0.594 |
BDBG_00482 | BDBG_05521 | A0A179U761 | A0A179UPQ2 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. | 0.690 |
BDBG_00482 | BDBG_06637 | A0A179U761 | A0A179UUL6 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | DNA polymerase. | 0.821 |
BDBG_00482 | BDBG_06751 | A0A179U761 | A0A179UVB6 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | N-acetyltransferase. | 0.850 |
BDBG_00482 | BDBG_08770 | A0A179U761 | A0A179V2D2 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | DNA polymerase kappa subunit. | 0.743 |
BDBG_00482 | BDBG_16478 | A0A179U761 | A0A179UBT4 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Protein kinase domain-containing protein. | 0.963 |
BDBG_00856 | BDBG_00482 | A0A179UCL1 | A0A179U761 | RevA protein. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.888 |
BDBG_00856 | BDBG_01210 | A0A179UCL1 | A0A179UBL3 | RevA protein. | DNA polymerase eta subunit. | 0.942 |
BDBG_00856 | BDBG_02777 | A0A179UCL1 | A0A179UHU6 | RevA protein. | DNA polymerase. | 0.911 |
BDBG_00856 | BDBG_02793 | A0A179UCL1 | A0A179UHW4 | RevA protein. | DNA polymerase delta subunit 3. | 0.950 |
BDBG_00856 | BDBG_03489 | A0A179UCL1 | A0A179UK93 | RevA protein. | DNA polymerase iota. | 0.885 |
BDBG_00856 | BDBG_05521 | A0A179UCL1 | A0A179UPQ2 | RevA protein. | DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. | 0.998 |
BDBG_00856 | BDBG_06637 | A0A179UCL1 | A0A179UUL6 | RevA protein. | DNA polymerase. | 0.999 |
BDBG_00856 | BDBG_06751 | A0A179UCL1 | A0A179UVB6 | RevA protein. | N-acetyltransferase. | 0.942 |
BDBG_00856 | BDBG_08770 | A0A179UCL1 | A0A179V2D2 | RevA protein. | DNA polymerase kappa subunit. | 0.887 |
BDBG_00856 | BDBG_16478 | A0A179UCL1 | A0A179UBT4 | RevA protein. | Protein kinase domain-containing protein. | 0.956 |
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