Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDBG_00920 | BDBG_01587 | A0A179UAM8 | A0A179UF61 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Chorismate mutase. | 0.979 |
BDBG_00920 | BDBG_03294 | A0A179UAM8 | A0A179UGU4 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Tryptophan synthase. | 0.999 |
BDBG_00920 | BDBG_04597 | A0A179UAM8 | A0A179UPR5 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Aromatic amino acid aminotransferase I. | 0.921 |
BDBG_00920 | BDBG_07095 | A0A179UAM8 | A0A179UX25 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family. | 0.808 |
BDBG_00920 | BDBG_07665 | A0A179UAM8 | A0A179UW16 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Aspartokinase. | 0.711 |
BDBG_00920 | BDBG_08682 | A0A179UAM8 | A0A179V074 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Aromatic-L-amino-acid decarboxylase. | 0.503 |
BDBG_00920 | BDBG_16210 | A0A179UAM8 | A0A179UB89 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Aminotran_1_2 domain-containing protein. | 0.621 |
BDBG_00920 | BDBG_16211 | A0A179UAM8 | A0A179UCN3 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Aminotran_1_2 domain-containing protein. | 0.621 |
BDBG_01587 | BDBG_00920 | A0A179UF61 | A0A179UAM8 | Chorismate mutase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.979 |
BDBG_01587 | BDBG_03294 | A0A179UF61 | A0A179UGU4 | Chorismate mutase. | Tryptophan synthase. | 0.724 |
BDBG_01587 | BDBG_04597 | A0A179UF61 | A0A179UPR5 | Chorismate mutase. | Aromatic amino acid aminotransferase I. | 0.921 |
BDBG_01587 | BDBG_07095 | A0A179UF61 | A0A179UX25 | Chorismate mutase. | Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family. | 0.991 |
BDBG_01587 | BDBG_07665 | A0A179UF61 | A0A179UW16 | Chorismate mutase. | Aspartokinase. | 0.737 |
BDBG_01587 | BDBG_16210 | A0A179UF61 | A0A179UB89 | Chorismate mutase. | Aminotran_1_2 domain-containing protein. | 0.537 |
BDBG_01587 | BDBG_16211 | A0A179UF61 | A0A179UCN3 | Chorismate mutase. | Aminotran_1_2 domain-containing protein. | 0.537 |
BDBG_03294 | BDBG_00920 | A0A179UGU4 | A0A179UAM8 | Tryptophan synthase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.999 |
BDBG_03294 | BDBG_01587 | A0A179UGU4 | A0A179UF61 | Tryptophan synthase. | Chorismate mutase. | 0.724 |
BDBG_03294 | BDBG_04038 | A0A179UGU4 | A0A179UJ79 | Tryptophan synthase. | Indoleamine 2,3-dioxygenase. | 0.800 |
BDBG_03294 | BDBG_04597 | A0A179UGU4 | A0A179UPR5 | Tryptophan synthase. | Aromatic amino acid aminotransferase I. | 0.937 |
BDBG_03294 | BDBG_06623 | A0A179UGU4 | A0A179UWQ0 | Tryptophan synthase. | Indoleamine 2,3-dioxygenase. | 0.800 |
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