Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDBG_00082 | BDBG_02010 | A0A179U7Q4 | A0A179UF80 | Rho GTPase activator. | Rab. | 0.668 |
BDBG_00082 | BDBG_16224 | A0A179U7Q4 | A0A179UAK2 | Rho GTPase activator. | LIM zinc-binding domain-containing protein. | 0.811 |
BDBG_00082 | BDBG_16225 | A0A179U7Q4 | A0A179U905 | Rho GTPase activator. | Rho-GAP domain-containing protein. | 0.811 |
BDBG_02010 | BDBG_00082 | A0A179UF80 | A0A179U7Q4 | Rab. | Rho GTPase activator. | 0.668 |
BDBG_02010 | BDBG_03529 | A0A179UF80 | A0A179UM46 | Rab. | Geranylgeranyl transferase type-2 subunit beta. | 0.620 |
BDBG_02010 | BDBG_06602 | A0A179UF80 | A0A179UWM9 | Rab. | Vacuolar segregation protein. | 0.872 |
BDBG_02010 | BDBG_06895 | A0A179UF80 | A0A179UUB3 | Rab. | Rho-GTPase-activating protein. | 0.668 |
BDBG_02010 | BDBG_08024 | A0A179UF80 | A0A179UZZ2 | Rab. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.643 |
BDBG_02010 | BDBG_08025 | A0A179UF80 | A0A179UZX0 | Rab. | Uncharacterized protein. | 0.643 |
BDBG_02010 | BDBG_09164 | A0A179UF80 | A0A179V164 | Rab. | GTP-binding protein ypt2. | 0.715 |
BDBG_02010 | BDBG_09173 | A0A179UF80 | A0A179V400 | Rab. | ATP synthase regulation protein NCA2. | 0.705 |
BDBG_02010 | BDBG_16224 | A0A179UF80 | A0A179UAK2 | Rab. | LIM zinc-binding domain-containing protein. | 0.796 |
BDBG_02010 | BDBG_16225 | A0A179UF80 | A0A179U905 | Rab. | Rho-GAP domain-containing protein. | 0.796 |
BDBG_03529 | BDBG_02010 | A0A179UM46 | A0A179UF80 | Geranylgeranyl transferase type-2 subunit beta. | Rab. | 0.620 |
BDBG_03529 | BDBG_08024 | A0A179UM46 | A0A179UZZ2 | Geranylgeranyl transferase type-2 subunit beta. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.965 |
BDBG_03529 | BDBG_08025 | A0A179UM46 | A0A179UZX0 | Geranylgeranyl transferase type-2 subunit beta. | Uncharacterized protein. | 0.948 |
BDBG_03529 | BDBG_09164 | A0A179UM46 | A0A179V164 | Geranylgeranyl transferase type-2 subunit beta. | GTP-binding protein ypt2. | 0.668 |
BDBG_03529 | BDBG_09173 | A0A179UM46 | A0A179V400 | Geranylgeranyl transferase type-2 subunit beta. | ATP synthase regulation protein NCA2. | 0.668 |
BDBG_06602 | BDBG_02010 | A0A179UWM9 | A0A179UF80 | Vacuolar segregation protein. | Rab. | 0.872 |
BDBG_06895 | BDBG_02010 | A0A179UUB3 | A0A179UF80 | Rho-GTPase-activating protein. | Rab. | 0.668 |
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