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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDBG_03033C2H2 finger domain-containing protein. (216 aa)    
Predicted Functional Partners:
BDBG_08266
Microfibrillar-associated protein MfaP1.
   
 0.998
BDBG_02316
DNA binding protein SART-1.
    
 0.995
BDBG_04269
Pre-mRNA splicing helicase.
   
 
 0.994
BDBG_02047
FF domain-containing protein, variant.
    
  0.992
BDBG_01220
RNA binding protein.
   
 0.983
BDBG_05405
Pre-mRNA splicing factor prp1.
   
 0.977
BDBG_01840
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
 0.965
BDBG_06394
Small nuclear ribonucleoprotein.
   
 0.963
BDBG_03012
U4/U6 small nuclear ribonucleoprotein.
   
 0.950
BDBG_04250
Serine/threonine-protein kinase PRP4.
   
  0.948
Your Current Organism:
Blastomyces gilchristii
NCBI taxonomy Id: 559298
Other names: Ajellomyces dermatitidis SLH#14081, Ajellomyces dermatitidis SLH14081, B. gilchristii SLH14081, Blastomyces dermatitidis SLH14081, Blastomyces gilchristii SLH14081
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.