Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDBG_01622 | BDBG_01734 | A0A179UD28 | A0A179UDT4 | CS domain-containing protein. | Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family. | 0.434 |
BDBG_01622 | BDBG_03292 | A0A179UD28 | A0A179UIZ7 | CS domain-containing protein. | Alcohol dehydrogenase, variant 1. | 0.415 |
BDBG_01734 | BDBG_01622 | A0A179UDT4 | A0A179UD28 | Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family. | CS domain-containing protein. | 0.434 |
BDBG_01734 | BDBG_03292 | A0A179UDT4 | A0A179UIZ7 | Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family. | Alcohol dehydrogenase, variant 1. | 0.414 |
BDBG_03292 | BDBG_01622 | A0A179UIZ7 | A0A179UD28 | Alcohol dehydrogenase, variant 1. | CS domain-containing protein. | 0.415 |
BDBG_03292 | BDBG_01734 | A0A179UIZ7 | A0A179UDT4 | Alcohol dehydrogenase, variant 1. | Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family. | 0.414 |
BDBG_03292 | BDBG_05861 | A0A179UIZ7 | A0A179UT30 | Alcohol dehydrogenase, variant 1. | Amino-acid N-acetyltransferase subunit Mak10. | 0.414 |
BDBG_03292 | MED11 | A0A179UIZ7 | A0A179ULD4 | Alcohol dehydrogenase, variant 1. | Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.414 |
BDBG_03292 | PSD2 | A0A179UIZ7 | A0A179URP9 | Alcohol dehydrogenase, variant 1. | Phosphatidylserine decarboxylase 2 alpha chain; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type II sub-subfamily. | 0.415 |
BDBG_05861 | BDBG_03292 | A0A179UT30 | A0A179UIZ7 | Amino-acid N-acetyltransferase subunit Mak10. | Alcohol dehydrogenase, variant 1. | 0.414 |
MED11 | BDBG_03292 | A0A179ULD4 | A0A179UIZ7 | Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Alcohol dehydrogenase, variant 1. | 0.414 |
PSD2 | BDBG_03292 | A0A179URP9 | A0A179UIZ7 | Phosphatidylserine decarboxylase 2 alpha chain; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type II sub-subfamily. | Alcohol dehydrogenase, variant 1. | 0.415 |