Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BDBG_00081 | BDBG_02439 | A0A179U846 | A0A179UFW6 | DNA-directed RNA polymerase II subunit RPB4. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.998 |
| BDBG_00081 | BDBG_03865 | A0A179U846 | A0A179ULG3 | DNA-directed RNA polymerase II subunit RPB4. | NIF domain-containing protein. | 0.540 |
| BDBG_00081 | BDBG_04174 | A0A179U846 | A0A179UJY4 | DNA-directed RNA polymerase II subunit RPB4. | Transcription initiation factor TFIIF subunit beta. | 0.987 |
| BDBG_00081 | BDBG_09188 | A0A179U846 | A0A179V3S5 | DNA-directed RNA polymerase II subunit RPB4. | Transcription initiation factor IIF subunit alpha. | 0.986 |
| BDBG_02185 | BDBG_03865 | A0A179UDQ7 | A0A179ULG3 | Mitochondrial import inner membrane translocase subunit tim-17. | NIF domain-containing protein. | 0.528 |
| BDBG_02185 | BDBG_05760 | A0A179UDQ7 | A0A179USN3 | Mitochondrial import inner membrane translocase subunit tim-17. | Mitochondrial import inner membrane translocase subunit tim23. | 0.995 |
| BDBG_02185 | BDBG_06986 | A0A179UDQ7 | A0A179UTT8 | Mitochondrial import inner membrane translocase subunit tim-17. | Mitochondrial import inner membrane translocase subunit tim21. | 0.932 |
| BDBG_02292 | BDBG_03865 | A0A179UDE9 | A0A179ULG3 | Uncharacterized protein. | NIF domain-containing protein. | 0.764 |
| BDBG_02292 | BDBG_06468 | A0A179UDE9 | A0A179URK3 | Uncharacterized protein. | Nuclear elongation and deformation protein 1. | 0.580 |
| BDBG_02439 | BDBG_00081 | A0A179UFW6 | A0A179U846 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | DNA-directed RNA polymerase II subunit RPB4. | 0.998 |
| BDBG_02439 | BDBG_03865 | A0A179UFW6 | A0A179ULG3 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | NIF domain-containing protein. | 0.517 |
| BDBG_02439 | BDBG_04174 | A0A179UFW6 | A0A179UJY4 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Transcription initiation factor TFIIF subunit beta. | 0.913 |
| BDBG_02439 | BDBG_09188 | A0A179UFW6 | A0A179V3S5 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Transcription initiation factor IIF subunit alpha. | 0.685 |
| BDBG_03205 | BDBG_03865 | A0A179UGJ9 | A0A179ULG3 | Uncharacterized protein. | NIF domain-containing protein. | 0.930 |
| BDBG_03205 | BDBG_06468 | A0A179UGJ9 | A0A179URK3 | Uncharacterized protein. | Nuclear elongation and deformation protein 1. | 0.768 |
| BDBG_03865 | BDBG_00081 | A0A179ULG3 | A0A179U846 | NIF domain-containing protein. | DNA-directed RNA polymerase II subunit RPB4. | 0.540 |
| BDBG_03865 | BDBG_02185 | A0A179ULG3 | A0A179UDQ7 | NIF domain-containing protein. | Mitochondrial import inner membrane translocase subunit tim-17. | 0.528 |
| BDBG_03865 | BDBG_02292 | A0A179ULG3 | A0A179UDE9 | NIF domain-containing protein. | Uncharacterized protein. | 0.764 |
| BDBG_03865 | BDBG_02439 | A0A179ULG3 | A0A179UFW6 | NIF domain-containing protein. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.517 |
| BDBG_03865 | BDBG_03205 | A0A179ULG3 | A0A179UGJ9 | NIF domain-containing protein. | Uncharacterized protein. | 0.930 |
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