STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDBG_04277Ribonuclease P/MRP protein subunit RPP1. (317 aa)    
Predicted Functional Partners:
BDBG_01080
Ribonuclease P protein subunit.
   
 0.999
BDBG_06924
Ribonuclease P/MRP protein subunit POP1.
   
 0.999
BDBG_07933
Ribonuclease P/MRP protein subunit POP5.
  
 0.999
BDBG_08574
RNAse P Rpr2/Rpp21 subunit domain-containing protein.
   
 0.999
BDBG_09429
Uncharacterized protein.
   
 0.999
BDBG_00444
Uncharacterized protein.
    
 0.998
BDBG_05899
Uncharacterized protein.
    
 0.998
BDBG_07952
Uncharacterized protein.
   
 0.994
BDBG_00792
40S ribosomal protein S9.
   
  0.953
BDBG_01281
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 
  0.949
Your Current Organism:
Blastomyces gilchristii
NCBI taxonomy Id: 559298
Other names: Ajellomyces dermatitidis SLH#14081, Ajellomyces dermatitidis SLH14081, B. gilchristii SLH14081, Blastomyces dermatitidis SLH14081, Blastomyces gilchristii SLH14081
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.