STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDBG_04831COP9 subunit 3. (499 aa)    
Predicted Functional Partners:
BDBG_04088
COP9 signalosome subunit 6.
   
 0.999
BDBG_02697
COP9 signalosome complex subunit 5.
   
 0.999
BDBG_04295
COP9 signalosome subunit 1.
   
 0.999
BDBG_04173
COP9 signalosome subunit CsnD.
   
 0.999
BDBG_04235
COP9 signalosome subunit 8.
   
 0.999
BDBG_06734
COP9 signalosome complex subunit 2.
   
 0.999
BDBG_02275
COP9 signalosome complex subunit 7a.
    
 0.998
BDBG_08548
RING-box protein 1.
   
 0.876
BDBG_17731
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
  0.849
BDBG_06545
DNA damage-binding protein 1.
    
 0.845
Your Current Organism:
Blastomyces gilchristii
NCBI taxonomy Id: 559298
Other names: Ajellomyces dermatitidis SLH#14081, Ajellomyces dermatitidis SLH14081, B. gilchristii SLH14081, Blastomyces dermatitidis SLH14081, Blastomyces gilchristii SLH14081
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.