Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDBG_05325 | BDBG_05332 | A0A179UNB8 | A0A179UT49 | 2-methylcitrate dehydratase. | Citrate synthase; Belongs to the citrate synthase family. | 0.466 |
BDBG_05325 | BDBG_05847 | A0A179UNB8 | A0A179UQ84 | 2-methylcitrate dehydratase. | Citrate synthase; Belongs to the citrate synthase family. | 0.444 |
BDBG_05325 | MET3 | A0A179UNB8 | A0A179UV60 | 2-methylcitrate dehydratase. | Sulfate adenylyltransferase; Catalyzes the first intracellular reaction of sulfate assimilation, forming adenosine-5'-phosphosulfate (APS) from inorganic sulfate and ATP. Plays an important role in sulfate activation as a component of the biosynthesis pathway of sulfur-containing amino acids. In the N-terminal section; belongs to the sulfate adenylyltransferase family. | 0.596 |
BDBG_05332 | BDBG_05325 | A0A179UT49 | A0A179UNB8 | Citrate synthase; Belongs to the citrate synthase family. | 2-methylcitrate dehydratase. | 0.466 |
BDBG_05332 | BDBG_05847 | A0A179UT49 | A0A179UQ84 | Citrate synthase; Belongs to the citrate synthase family. | Citrate synthase; Belongs to the citrate synthase family. | 0.902 |
BDBG_05847 | BDBG_05325 | A0A179UQ84 | A0A179UNB8 | Citrate synthase; Belongs to the citrate synthase family. | 2-methylcitrate dehydratase. | 0.444 |
BDBG_05847 | BDBG_05332 | A0A179UQ84 | A0A179UT49 | Citrate synthase; Belongs to the citrate synthase family. | Citrate synthase; Belongs to the citrate synthase family. | 0.902 |
MET3 | BDBG_05325 | A0A179UV60 | A0A179UNB8 | Sulfate adenylyltransferase; Catalyzes the first intracellular reaction of sulfate assimilation, forming adenosine-5'-phosphosulfate (APS) from inorganic sulfate and ATP. Plays an important role in sulfate activation as a component of the biosynthesis pathway of sulfur-containing amino acids. In the N-terminal section; belongs to the sulfate adenylyltransferase family. | 2-methylcitrate dehydratase. | 0.596 |