STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDBG_0767325S rRNA adenine-N(1) methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of an adenine present in helix 65 in 25S rRNA; Belongs to the BMT2 family. (362 aa)    
Predicted Functional Partners:
BDBG_08491
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
  
 0.709
BDBG_05695
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
  
 0.686
BDBG_02521
Translation initiation factor IF-2.
  
  
 0.666
BDBG_03199
Translation initiation factor 5B.
  
  
 0.666
BDBG_00837
rRNA biogenesis protein RRP5.
  
  
 0.655
BDBG_03873
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.630
BDBG_07669
50S ribosomal protein L23Ae.
   
    0.617
BDBG_03325
DNA-directed RNA polymerase II subunit RPB3.
   
  
 0.589
BDBG_04590
DNA-directed RNA polymerase I and III subunit RPAC1.
   
  
 0.589
BDBG_05895
60S ribosomal protein RML2.
   
   0.586
Your Current Organism:
Blastomyces gilchristii
NCBI taxonomy Id: 559298
Other names: Ajellomyces dermatitidis SLH#14081, Ajellomyces dermatitidis SLH14081, B. gilchristii SLH14081, Blastomyces dermatitidis SLH14081, Blastomyces gilchristii SLH14081
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.