Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDBG_01562 | BDBG_08104 | A0A179UD90 | A0A179UXI7 | RalA-binding protein 1. | Aldoxime dehydratase. | 0.631 |
BDBG_01707 | BDBG_02032 | A0A179UDQ4 | A0A179UEI2 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | Biotin synthetase. | 0.618 |
BDBG_01707 | BDBG_08104 | A0A179UDQ4 | A0A179UXI7 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | Aldoxime dehydratase. | 0.450 |
BDBG_02032 | BDBG_01707 | A0A179UEI2 | A0A179UDQ4 | Biotin synthetase. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.618 |
BDBG_02032 | BDBG_08104 | A0A179UEI2 | A0A179UXI7 | Biotin synthetase. | Aldoxime dehydratase. | 0.457 |
BDBG_02032 | BDBG_08554 | A0A179UEI2 | A0A179V1X2 | Biotin synthetase. | Protein Arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family. | 0.664 |
BDBG_03342 | BDBG_05604 | A0A179UJ50 | A0A179UQ05 | Thiamine thiazole synthase; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5- (2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron- dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance; Belongs to the T [...] | Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family. | 0.625 |
BDBG_03342 | BDBG_08104 | A0A179UJ50 | A0A179UXI7 | Thiamine thiazole synthase; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5- (2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron- dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance; Belongs to the T [...] | Aldoxime dehydratase. | 0.710 |
BDBG_03731 | BDBG_08104 | A0A179UIU4 | A0A179UXI7 | Ubiquitin-like 1-activating enzyme E1 A. | Aldoxime dehydratase. | 0.434 |
BDBG_04462 | BDBG_08104 | A0A179UPB4 | A0A179UXI7 | Pyridoxine kinase. | Aldoxime dehydratase. | 0.690 |
BDBG_05604 | BDBG_03342 | A0A179UQ05 | A0A179UJ50 | Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family. | Thiamine thiazole synthase; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5- (2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron- dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance; Belongs to the T [...] | 0.625 |
BDBG_05604 | BDBG_08104 | A0A179UQ05 | A0A179UXI7 | Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family. | Aldoxime dehydratase. | 0.456 |
BDBG_08104 | BDBG_01562 | A0A179UXI7 | A0A179UD90 | Aldoxime dehydratase. | RalA-binding protein 1. | 0.631 |
BDBG_08104 | BDBG_01707 | A0A179UXI7 | A0A179UDQ4 | Aldoxime dehydratase. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.450 |
BDBG_08104 | BDBG_02032 | A0A179UXI7 | A0A179UEI2 | Aldoxime dehydratase. | Biotin synthetase. | 0.457 |
BDBG_08104 | BDBG_03342 | A0A179UXI7 | A0A179UJ50 | Aldoxime dehydratase. | Thiamine thiazole synthase; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5- (2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron- dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance; Belongs to the T [...] | 0.710 |
BDBG_08104 | BDBG_03731 | A0A179UXI7 | A0A179UIU4 | Aldoxime dehydratase. | Ubiquitin-like 1-activating enzyme E1 A. | 0.434 |
BDBG_08104 | BDBG_04462 | A0A179UXI7 | A0A179UPB4 | Aldoxime dehydratase. | Pyridoxine kinase. | 0.690 |
BDBG_08104 | BDBG_05604 | A0A179UXI7 | A0A179UQ05 | Aldoxime dehydratase. | Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family. | 0.456 |
BDBG_08104 | BDBG_08554 | A0A179UXI7 | A0A179V1X2 | Aldoxime dehydratase. | Protein Arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family. | 0.668 |
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