Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BDBG_01093 | BDBG_03405 | A0A179UDH9 | A0A179UHV6 | Pyridox_oxase_2 domain-containing protein. | Protein NMT1, variant. | 0.800 |
| BDBG_01093 | BDBG_04462 | A0A179UDH9 | A0A179UPB4 | Pyridox_oxase_2 domain-containing protein. | Pyridoxine kinase. | 0.963 |
| BDBG_01093 | BDBG_08090 | A0A179UDH9 | A0A179V045 | Pyridox_oxase_2 domain-containing protein. | Glutamine amidotransferase. | 0.915 |
| BDBG_01093 | BDBG_08501 | A0A179UDH9 | A0A179UZK3 | Pyridox_oxase_2 domain-containing protein. | Pyridoxine biosynthesis protein pyroA; Belongs to the PdxS/SNZ family. | 0.900 |
| BDBG_01240 | BDBG_01501 | A0A179UC48 | A0A179UEV9 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.600 |
| BDBG_01240 | BDBG_08090 | A0A179UC48 | A0A179V045 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | Glutamine amidotransferase. | 0.823 |
| BDBG_01240 | BDBG_08501 | A0A179UC48 | A0A179UZK3 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | Pyridoxine biosynthesis protein pyroA; Belongs to the PdxS/SNZ family. | 0.823 |
| BDBG_01501 | BDBG_01240 | A0A179UEV9 | A0A179UC48 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.600 |
| BDBG_01501 | BDBG_04462 | A0A179UEV9 | A0A179UPB4 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Pyridoxine kinase. | 0.429 |
| BDBG_01501 | BDBG_08090 | A0A179UEV9 | A0A179V045 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Glutamine amidotransferase. | 0.833 |
| BDBG_01501 | BDBG_08501 | A0A179UEV9 | A0A179UZK3 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Pyridoxine biosynthesis protein pyroA; Belongs to the PdxS/SNZ family. | 0.817 |
| BDBG_03405 | BDBG_01093 | A0A179UHV6 | A0A179UDH9 | Protein NMT1, variant. | Pyridox_oxase_2 domain-containing protein. | 0.800 |
| BDBG_03405 | BDBG_04462 | A0A179UHV6 | A0A179UPB4 | Protein NMT1, variant. | Pyridoxine kinase. | 0.800 |
| BDBG_03405 | BDBG_08090 | A0A179UHV6 | A0A179V045 | Protein NMT1, variant. | Glutamine amidotransferase. | 0.807 |
| BDBG_03405 | BDBG_08501 | A0A179UHV6 | A0A179UZK3 | Protein NMT1, variant. | Pyridoxine biosynthesis protein pyroA; Belongs to the PdxS/SNZ family. | 0.850 |
| BDBG_04413 | BDBG_06812 | A0A179UKS4 | A0A179UTV1 | SGNH_hydro domain-containing protein. | GMP synthase. | 0.663 |
| BDBG_04413 | BDBG_07606 | A0A179UKS4 | A0A179UYD8 | SGNH_hydro domain-containing protein. | GMP synthase. | 0.620 |
| BDBG_04413 | BDBG_08090 | A0A179UKS4 | A0A179V045 | SGNH_hydro domain-containing protein. | Glutamine amidotransferase. | 0.967 |
| BDBG_04462 | BDBG_01093 | A0A179UPB4 | A0A179UDH9 | Pyridoxine kinase. | Pyridox_oxase_2 domain-containing protein. | 0.963 |
| BDBG_04462 | BDBG_01501 | A0A179UPB4 | A0A179UEV9 | Pyridoxine kinase. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.429 |
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