STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDBG_08334Cullin binding protein CanA. (1340 aa)    
Predicted Functional Partners:
BDBG_08548
RING-box protein 1.
    
 0.960
BDBG_17731
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.952
BDBG_05420
PHD finger and JmjC domain-containing protein, variant 1.
   
 0.950
BDBG_03785
Cullin 1; Belongs to the cullin family.
   
 0.948
BDBG_03362
Cullin 3; Belongs to the cullin family.
   
 0.933
BDBG_09182
Uncharacterized protein.
    
 0.863
BDBG_07946
Transcription elongation factor B, polypeptide 1; Belongs to the SKP1 family.
     
 0.831
BDBG_06545
DNA damage-binding protein 1.
   
 0.813
BDBG_05181
Ubiquitin-conjugating enzyme E2 M; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.804
BDBG_02836
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
    
 0.792
Your Current Organism:
Blastomyces gilchristii
NCBI taxonomy Id: 559298
Other names: Ajellomyces dermatitidis SLH#14081, Ajellomyces dermatitidis SLH14081, B. gilchristii SLH14081, Blastomyces dermatitidis SLH14081, Blastomyces gilchristii SLH14081
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.