Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDBG_00933 | BDBG_01515 | A0A179U8P4 | A0A179UAM2 | RNA binding domain-containing protein. | Translation initiation factor 4A; Belongs to the DEAD box helicase family. | 0.958 |
BDBG_00933 | BDBG_01653 | A0A179U8P4 | A0A179UBX4 | RNA binding domain-containing protein. | Nonsense-mediated mRNA decay protein Upf3. | 0.878 |
BDBG_00933 | BDBG_01862 | A0A179U8P4 | A0A179UCB5 | RNA binding domain-containing protein. | Nuclear transport factor 2 domain-containing protein, variant. | 0.460 |
BDBG_00933 | BDBG_03482 | A0A179U8P4 | A0A179ULY8 | RNA binding domain-containing protein. | Nucleoporin SONB. | 0.662 |
BDBG_00933 | BDBG_03937 | A0A179U8P4 | A0A179UL28 | RNA binding domain-containing protein. | Poly(A)+ RNA export protein. | 0.767 |
BDBG_00933 | BDBG_05511 | A0A179U8P4 | A0A179UPP3 | RNA binding domain-containing protein. | Nuclear pore complex subunit Nup159. | 0.729 |
BDBG_00933 | BDBG_07373 | A0A179U8P4 | A0A179V034 | RNA binding domain-containing protein. | Uncharacterized protein. | 0.984 |
BDBG_00933 | BDBG_08091 | A0A179U8P4 | A0A179UZY2 | RNA binding domain-containing protein. | Nuclear cap-binding protein subunit 2. | 0.877 |
BDBG_00933 | BDBG_09017 | A0A179U8P4 | A0A179V389 | RNA binding domain-containing protein. | mRNA export factor mex67. | 0.993 |
BDBG_00933 | BDBG_16431 | A0A179U8P4 | A0A179UB57 | RNA binding domain-containing protein. | RRM domain-containing protein. | 0.900 |
BDBG_01515 | BDBG_00933 | A0A179UAM2 | A0A179U8P4 | Translation initiation factor 4A; Belongs to the DEAD box helicase family. | RNA binding domain-containing protein. | 0.958 |
BDBG_01515 | BDBG_01653 | A0A179UAM2 | A0A179UBX4 | Translation initiation factor 4A; Belongs to the DEAD box helicase family. | Nonsense-mediated mRNA decay protein Upf3. | 0.968 |
BDBG_01515 | BDBG_01862 | A0A179UAM2 | A0A179UCB5 | Translation initiation factor 4A; Belongs to the DEAD box helicase family. | Nuclear transport factor 2 domain-containing protein, variant. | 0.616 |
BDBG_01515 | BDBG_03482 | A0A179UAM2 | A0A179ULY8 | Translation initiation factor 4A; Belongs to the DEAD box helicase family. | Nucleoporin SONB. | 0.648 |
BDBG_01515 | BDBG_03937 | A0A179UAM2 | A0A179UL28 | Translation initiation factor 4A; Belongs to the DEAD box helicase family. | Poly(A)+ RNA export protein. | 0.800 |
BDBG_01515 | BDBG_05511 | A0A179UAM2 | A0A179UPP3 | Translation initiation factor 4A; Belongs to the DEAD box helicase family. | Nuclear pore complex subunit Nup159. | 0.723 |
BDBG_01515 | BDBG_07373 | A0A179UAM2 | A0A179V034 | Translation initiation factor 4A; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.694 |
BDBG_01515 | BDBG_08091 | A0A179UAM2 | A0A179UZY2 | Translation initiation factor 4A; Belongs to the DEAD box helicase family. | Nuclear cap-binding protein subunit 2. | 0.824 |
BDBG_01515 | BDBG_09017 | A0A179UAM2 | A0A179V389 | Translation initiation factor 4A; Belongs to the DEAD box helicase family. | mRNA export factor mex67. | 0.966 |
BDBG_01515 | BDBG_16431 | A0A179UAM2 | A0A179UB57 | Translation initiation factor 4A; Belongs to the DEAD box helicase family. | RRM domain-containing protein. | 0.958 |
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