STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Piso0_005273Piso0_005273 protein. (177 aa)    
Predicted Functional Partners:
Piso0_001093
Piso0_001093 protein.
    
 0.993
Piso0_005086
Piso0_005086 protein; Belongs to the DEAD box helicase family.
    
 
 0.862
Piso0_005086-2
Piso0_005086 protein; Belongs to the DEAD box helicase family.
    
 
 0.862
Piso0_001971
Piso0_001971 protein.
    
 
 0.813
Piso0_001971-2
Piso0_001971 protein.
    
 
 0.813
Piso0_003577
Piso0_003577 protein.
    
 
 0.689
Piso0_002501
Piso0_002501 protein.
    
   0.611
Piso0_002501-2
Piso0_002501 protein.
    
   0.611
Piso0_000386
Piso0_000386 protein.
    
 
 0.561
Piso0_004401
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 
 0.541
Your Current Organism:
Millerozyma farinosa
NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.