STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_11878Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
TERG_01300
SMC_N domain-containing protein.
   
 0.975
TERG_07877
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.969
TERG_00033
SP-RING-type domain-containing protein.
    
 0.968
TERG_00850
MAGE domain-containing protein.
   
 0.965
TERG_04314
UmuC domain-containing protein.
  
 0.936
TERG_00835
Uncharacterized protein.
   
 0.932
TERG_02331
SCD domain-containing protein.
   
 0.914
TERG_11877
Uncharacterized protein.
 
      0.900
TERG_02916
Uncharacterized protein.
   
 
 0.899
TERG_02676
Cnd1_N domain-containing protein.
   
 0.895
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.