TERG_12198 protein (Trichophyton rubrum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TERG_12198

Uncharacterized protein. (155 aa)

Predicted Functional Partners:

TERG_08837

0.680

TERG_08903

0.619

TERG_00065

0.552

TERG_03744

0.506

TERG_05101

0.506

TERG_02162

0.492

TERG_03083

0.492

TERG_02032

0.490

TERG_07874

0.489

TERG_08323

0.489

Your Current Organism:

Trichophyton rubrum

NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TERG_00065	TERG_08837	F2SDN2	F2SQI9	Uncharacterized protein.	Uncharacterized protein.	0.552
TERG_00065	TERG_12198	F2SDN2	A0A080WJQ6	Uncharacterized protein.	Uncharacterized protein.	0.552
TERG_02032	TERG_08837	F2SJ48	F2SQI9	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.490
TERG_02032	TERG_12198	F2SJ48	A0A080WJQ6	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.490
TERG_02162	TERG_08837	F2SG37	F2SQI9	Uncharacterized protein.	Uncharacterized protein.	0.492
TERG_02162	TERG_12198	F2SG37	A0A080WJQ6	Uncharacterized protein.	Uncharacterized protein.	0.492
TERG_03083	TERG_08837	F2SMH3	F2SQI9	3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. Belongs to the EPSP synthase family. In the 3rd section; belongs to the shikimate kinase family. In the C-terminal section; belongs to the shikimate dehydrogenase family.	Uncharacterized protein.	0.492
TERG_03083	TERG_12198	F2SMH3	A0A080WJQ6	3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. Belongs to the EPSP synthase family. In the 3rd section; belongs to the shikimate kinase family. In the C-terminal section; belongs to the shikimate dehydrogenase family.	Uncharacterized protein.	0.492
TERG_03744	TERG_07874	F2SLR8	F2SZA3	Uncharacterized protein.	Metallophos domain-containing protein.	0.489
TERG_03744	TERG_08323	F2SLR8	F2T0I6	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.489
TERG_03744	TERG_08837	F2SLR8	F2SQI9	Uncharacterized protein.	Uncharacterized protein.	0.506
TERG_03744	TERG_12198	F2SLR8	A0A080WJQ6	Uncharacterized protein.	Uncharacterized protein.	0.506
TERG_05101	TERG_07874	F2SR84	F2SZA3	HTH myb-type domain-containing protein.	Metallophos domain-containing protein.	0.489
TERG_05101	TERG_08323	F2SR84	F2T0I6	HTH myb-type domain-containing protein.	Serine/threonine-protein phosphatase.	0.489
TERG_05101	TERG_08837	F2SR84	F2SQI9	HTH myb-type domain-containing protein.	Uncharacterized protein.	0.506
TERG_05101	TERG_12198	F2SR84	A0A080WJQ6	HTH myb-type domain-containing protein.	Uncharacterized protein.	0.506
TERG_07874	TERG_03744	F2SZA3	F2SLR8	Metallophos domain-containing protein.	Uncharacterized protein.	0.489
TERG_07874	TERG_05101	F2SZA3	F2SR84	Metallophos domain-containing protein.	HTH myb-type domain-containing protein.	0.489
TERG_07874	TERG_08837	F2SZA3	F2SQI9	Metallophos domain-containing protein.	Uncharacterized protein.	0.489
TERG_07874	TERG_08903	F2SZA3	F2SV64	Metallophos domain-containing protein.	Uncharacterized protein.	0.959