STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_12134Uncharacterized protein. (733 aa)    
Predicted Functional Partners:
TERG_12133
Uncharacterized protein.
 
     0.925
TERG_00667
Uncharacterized protein.
    
 
 0.505
TERG_02399
RRM domain-containing protein.
    
 
 0.443
TERG_06627
RNA-dependent RNA polymerase.
    
 
 0.443
TERG_02548
Uncharacterized protein.
    
 
 0.415
TERG_00351
Uncharacterized protein.
    
 
 0.413
TERG_05516
Piwi domain-containing protein.
 
  
 
 0.413
TERG_08126
Uncharacterized protein.
    
 
 0.413
TERG_00474
A to I editase domain-containing protein.
   
  
 0.405
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.