STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_12496Uncharacterized protein. (108 aa)    
Predicted Functional Partners:
TERG_03916
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
     
 0.540
TERG_02477
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
     
 0.533
TERG_05883
Farnesyl-diphosphate farnesyltransferase.
     
 0.521
TERG_07740
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
     
 0.520
TERG_12495
Uncharacterized protein.
 
      0.451
TERG_12494
Uncharacterized protein.
 
      0.443
TERG_03707
Uncharacterized protein.
     
 0.407
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.