STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_11576Uncharacterized protein. (147 aa)    
Predicted Functional Partners:
TERG_03555
Tryptophan synthase.
  
 
 0.912
TERG_11577
tRNA-synt_1e domain-containing protein.
 
      0.899
TERG_06578
Uncharacterized protein.
   
 0.897
TERG_05984
Uncharacterized protein.
  
 
 0.755
TERG_01112
Leucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.740
TERG_06612
Leucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.681
TERG_07921
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
    
 0.670
TERG_00813
SpoU_methylase domain-containing protein.
  
 
 0.660
TERG_04198
Glycine-tRNA ligase.
  
 
 0.634
TERG_02450
Phosphoserine phosphatase SerB.
   
 
 0.625
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.