STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_00576Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family. (385 aa)    
Predicted Functional Partners:
TERG_07241
Saccharopine dehydrogenase [NADP+, L-glutamate-forming].
  
 
 0.971
TERG_05558
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.770
TERG_03598
Aspartate-semialdehyde dehydrogenase.
   
 
 0.633
TERG_07187
L-aminoadipate-semialdehyde dehydrogenase large subunit.
 
 
 0.620
TERG_05819
Iso_dh domain-containing protein.
   
  
 0.610
TERG_01358
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
    
 0.605
TERG_04945
Agmatinase; Belongs to the arginase family.
    
 0.589
TERG_07872
Homoserine O-acetyltransferase.
    
 0.586
TERG_04574
S-adenosylmethionine decarboxylase proenzyme.
     
 0.570
TERG_03555
Tryptophan synthase.
  
  
 0.566
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.