STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_00605Uncharacterized protein. (432 aa)    
Predicted Functional Partners:
TERG_04039
Uncharacterized protein.
    
 0.789
TERG_01515
Uncharacterized protein.
  
 0.650
TERG_07764
Protein transporter SEC61 subunit alpha.
   
  
 0.631
TERG_03715
Uncharacterized protein.
    
 
 0.547
TERG_03408
Uncharacterized protein.
    
 
 0.543
TERG_00973
Uncharacterized protein.
   
  
 0.517
TERG_11731
DUF202 domain-containing protein.
  
 0.515
TERG_08250
Uncharacterized protein.
  
 0.515
TERG_05669
Uncharacterized protein.
    
 
 0.469
TERG_00628
Uncharacterized protein.
   
 
  0.447
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.