STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_00719TOG domain-containing protein. (1630 aa)    
Predicted Functional Partners:
TERG_04628
Uncharacterized protein.
   
 
 0.975
TERG_00720
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
 
 
   0.950
TERG_04086
OBG-type G domain-containing protein.
   
 
 0.944
TERG_00462
40S ribosomal protein; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.933
TERG_06275
40S ribosomal protein; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.933
TERG_01952
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.924
TERG_02604
40S ribosomal protein S20.
   
   0.923
TERG_05866
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.923
TERG_00545
Uncharacterized protein.
   
   0.917
TERG_04450
Ribosomal_L23eN domain-containing protein.
   
   0.916
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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