STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_00020SH3 domain-containing protein. (393 aa)    
Predicted Functional Partners:
TERG_00153
Uncharacterized protein.
    
 
 0.921
TERG_01984
Uncharacterized protein.
    
 
 0.898
TERG_02871
CUE domain-containing protein.
    
   0.775
TERG_00021
Zds_C domain-containing protein.
 
      0.742
TERG_02951
Uncharacterized protein.
   
 
 0.568
TERG_00015
Arf-GAP domain-containing protein.
    
 
 0.542
TERG_05321
Uncharacterized protein.
    
  0.530
TERG_06637
Actin.
    
 
 0.477
TERG_01677
Glutamine-fructose-6-phosphate transaminase (Isomerizing).
   
    0.432
TERG_05180
Glutamine amidotransferase type-2 domain-containing protein.
   
    0.432
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.