STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_00068Homogentisate 1,2-dioxygenase. (449 aa)    
Predicted Functional Partners:
TERG_00066
4-hydroxyphenylpyruvate dioxygenase.
  
 0.989
TERG_07164
4-hydroxyphenylpyruvate dioxygenase.
  
 0.972
TERG_00070
Maleylacetoacetate isomerase; Belongs to the GST superfamily.
 
 
 0.962
TERG_00069
Fumarylacetoacetase.
 
 0.910
TERG_01661
FAA_hydrolase domain-containing protein.
  
 
 0.811
TERG_08373
FAA_hydrolase domain-containing protein.
  
 
 0.811
TERG_02723
Uncharacterized protein.
  
  
 0.770
TERG_05943
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
  
 0.766
TERG_02738
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
    
 0.727
TERG_02740
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
    
 0.727
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.