STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_00156ERCC4 domain-containing protein. (990 aa)    
Predicted Functional Partners:
TERG_04602
Uncharacterized protein.
   
 0.999
TERG_04434
DNA repair protein.
    
 0.984
TERG_04692
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.983
TERG_04967
Asparagine-tRNA ligase.
  
 0.980
TERG_06018
DUF1767 domain-containing protein.
    
 0.963
TERG_07476
ERCC4 domain-containing protein.
    
 0.960
TERG_07623
Uncharacterized protein.
   
 0.949
TERG_03350
Uncharacterized protein.
    
 0.946
TERG_07603
Uncharacterized protein.
    
 0.946
TERG_06795
Nuclear protein localization protein 4.
   
 0.945
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.