STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_00245PHD-type domain-containing protein. (532 aa)    
Predicted Functional Partners:
TERG_04518
Histone acetyltransferase type B subunit 2.
   
 0.929
TERG_04550
Uncharacterized protein.
    
 0.878
TERG_00246
Uncharacterized protein.
 
      0.860
TERG_04145
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.813
TERG_00944
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.744
TERG_03525
RPOLD domain-containing protein.
   
  0.710
TERG_03736
TPR_REGION domain-containing protein.
    
 0.702
TERG_08153
Uncharacterized protein.
    
 0.702
TERG_08584
UBA domain-containing protein.
    
 0.702
TERG_03429
RPOL9 domain-containing protein.
    
  0.693
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.