STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_01060Uncharacterized protein. (330 aa)    
Predicted Functional Partners:
TERG_05158
Mlh1_C domain-containing protein.
    
 0.947
TERG_04334
Zn(2)-C6 fungal-type domain-containing protein.
  
 0.892
TERG_06906
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.892
TERG_02621
XPGI domain-containing protein.
   
 0.879
TERG_11788
Uncharacterized protein.
  
 0.858
TERG_11789
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.858
TERG_00930
DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.858
TERG_02236
DNA mismatch repair protein MSH3.
  
 0.841
TERG_06670
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.841
TERG_07948
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.840
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.