STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_01100AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (186 aa)    
Predicted Functional Partners:
TERG_01688
Adaptin_N domain-containing protein.
    
 0.995
TERG_05087
Adaptin_N domain-containing protein.
    
 0.992
TERG_00817
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.987
TERG_00390
AP-1 complex subunit gamma.
    
 0.979
TERG_01633
CFEM domain-containing protein.
    
 0.920
TERG_08286
CFEM domain-containing protein.
    
 0.920
TERG_08562
Uncharacterized protein.
    
 0.920
TERG_01102
60S ribosomal protein L8-B.
 
    
 0.901
TERG_04229
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.874
TERG_00541
Uncharacterized protein.
 
      0.848
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.