STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_01171Uncharacterized protein. (2142 aa)    
Predicted Functional Partners:
TERG_06765
ULK/ULK protein kinase.
   
 0.997
TERG_05154
Uncharacterized protein.
    
 0.994
TERG_01068
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.973
TERG_02016
Lipase_3 domain-containing protein.
    
 
 0.970
TERG_07864
Uncharacterized protein.
    
 
 0.765
TERG_03032
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
    
 
 0.672
TERG_06497
Autophagy-related protein.
   
 
 0.552
TERG_04873
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
    
 
 0.538
TERG_01803
Uncharacterized protein.
   
  
 0.521
TERG_02632
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy.
   
  
 0.519
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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