STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_01219Uncharacterized protein. (355 aa)    
Predicted Functional Partners:
TERG_03065
Malic enzyme.
    
 0.831
TERG_06973
Uncharacterized protein.
    
 0.787
TERG_04294
Uncharacterized protein.
  
 
 0.783
TERG_00102
Fumarate hydratase, class II.
    
 0.758
TERG_04961
APH domain-containing protein.
    
 0.758
TERG_03414
Uncharacterized protein.
    
 0.736
TERG_01272
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.719
TERG_04125
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.719
TERG_03187
Aspartate aminotransferase.
     
 0.703
TERG_03384
Aminotran_1_2 domain-containing protein.
     
 0.703
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.