STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_02389RRM domain-containing protein. (416 aa)    
Predicted Functional Partners:
TERG_03424
Nuclear cap-binding protein subunit 2.
    
 0.673
TERG_05929
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.662
TERG_01940
Small nuclear ribonucleoprotein G.
    
 0.653
TERG_04893
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.649
TERG_00804
zf-U1 domain-containing protein.
    
 0.648
TERG_01651
RRM domain-containing protein.
    
 0.642
TERG_06343
Uncharacterized protein.
    
 0.642
TERG_06292
SF3b1 domain-containing protein.
    
 0.638
TERG_01587
Eukaryotic translation initiation factor 2 subunit gamma.
   
 0.634
TERG_07745
ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family.
   
 0.630
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.