STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_02636F-box domain-containing protein. (595 aa)    
Predicted Functional Partners:
TERG_08611
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 0.845
TERG_02778
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.790
TERG_03869
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.790
TERG_04180
RING-box protein 1A.
    
 0.738
TERG_00739
Ubiquitin-like protein 1.
    
 0.737
TERG_00217
Ubiquitin-40S ribosomal protein S27a.
    
  0.732
TERG_04610
BZIP domain-containing protein.
    
  0.732
TERG_04219
BRCT domain-containing protein.
    
 0.724
TERG_01381
AN1-type domain-containing protein.
    
 0.697
TERG_07138
Polyubiquitin.
    
 0.697
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.