STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_02741Kin17_mid domain-containing protein. (284 aa)    
Predicted Functional Partners:
TERG_07863
RRM domain-containing protein.
   
   0.849
TERG_06025
Uncharacterized protein.
    
 0.837
TERG_01198
Pre-mRNA-splicing factor rse1.
    
   0.823
TERG_06292
SF3b1 domain-containing protein.
    
   0.823
TERG_07301
Matrin-type domain-containing protein.
    
 
 0.801
TERG_07744
Matrin-type domain-containing protein.
    
 
 0.798
TERG_04319
Uncharacterized protein.
   
   0.770
TERG_05461
Uncharacterized protein.
   
   0.770
TERG_00959
RRM domain-containing protein.
   
   0.759
TERG_01874
Tr-type G domain-containing protein.
    
   0.753
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.