STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_03603Uncharacterized protein. (247 aa)    
Predicted Functional Partners:
TERG_05496
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
  
 0.994
TERG_00065
Uncharacterized protein.
  
 0.981
TERG_07800
Uncharacterized protein.
   
 
 0.936
TERG_02409
Cytochrome c oxidase subunit 6A, mitochondrial.
     
 0.927
TERG_02428
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
  
 
 0.926
TERG_04143
Uncharacterized protein.
     
 0.922
TERG_03604
Replication factor C subunit 5.
 
      0.899
TERG_01415
Ribosomal protein L24.
 
 
    0.880
TERG_03597
Uncharacterized protein.
 
      0.843
TERG_02083
Uncharacterized protein.
   
 
 0.841
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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